Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC091839.1-201ENST00000513087 269 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC084251.1-201ENST00000521867 382 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 EIF4A1P9-201ENST00000576035 1207 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 MIR4682-201ENST00000580643 80 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC096708.1-201ENST00000584419 658 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AL118556.2-201ENST00000614375 824 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC138904.2-201ENST00000614412 107 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 RHOXF1P2-201ENST00000635431 502 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 STAU2-AS1-201ENST00000517604 2076 ntTSL 2 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 PSMC1P3-201ENST00000453822 1318 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AP000705.2-201ENST00000433524 1386 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC073349.2-201ENST00000427545 1603 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AL136140.2-201ENST00000624717 1705 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 YBX1P8-201ENST00000421881 943 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC016734.1-201ENST00000436998 654 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 PGGT1BP1-201ENST00000455321 1023 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AF186996.1-201ENST00000466578 1015 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 RN7SL272P-201ENST00000487762 289 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC008638.2-201ENST00000503840 715 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC098583.2-201ENST00000504151 372 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 SSR2-215ENST00000529008 849 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC079598.4-201ENST00000549647 265 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC133552.4-201ENST00000576103 676 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 ACP5-208ENST00000590420 301 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 YTHDF2P1-201ENST00000604759 1271 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 SLC9B1P3-201ENST00000452667 1334 ntBASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP1Q96SZ6 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
CDK5RAP1Q96SZ6 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP1Q96SZ6 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
CDK5RAP1Q96SZ6 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP1Q96SZ6 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP1Q96SZ6 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP1Q96SZ6 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC8.46□□□□□ -1.05
CDK5RAP1Q96SZ6 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
CDK5RAP1Q96SZ6 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDK5RAP1Q96SZ6 RN7SKP26-201ENST00000410247 293 ntBASIC8.46□□□□□ -1.06
CDK5RAP1Q96SZ6 RN7SKP119-201ENST00000410753 273 ntBASIC8.46□□□□□ -1.06
CDK5RAP1Q96SZ6 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC8.46□□□□□ -1.06
CDK5RAP1Q96SZ6 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC8.46□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC8.46□□□□□ -1.06
CDK5RAP1Q96SZ6 AL121578.1-201ENST00000428051 892 ntBASIC8.46□□□□□ -1.06
CDK5RAP1Q96SZ6 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms