Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MIR8075-201ENST00000614354 80 ntBASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 FAM74A6-203ENST00000615956 481 ntBASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AC074029.3-201ENST00000618623 312 ntBASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 MED15P6-202ENST00000621415 787 ntBASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AC090373.1-201ENST00000623955 603 ntBASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 CD40LG-202ENST00000370629 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 KLRC1-207ENST00000544822 1600 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 RAN-201ENST00000392367 780 ntTSL 5 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 RPSAP42-201ENST00000403415 878 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 RPL7P13-201ENST00000415103 741 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC013410.2-201ENST00000422627 201 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 SEPHS1P1-201ENST00000426891 958 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 SDR42E1P3-201ENST00000438345 502 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC017099.1-201ENST00000448261 1028 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 RN7SL608P-201ENST00000492377 279 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC091982.1-201ENST00000518134 520 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC009779.4-201ENST00000554248 611 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 RN7SL154P-201ENST00000578043 324 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 MIR3680-2-201ENST00000578247 87 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 MIR3714-201ENST00000579507 65 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 MIR3680-1-201ENST00000581433 87 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 SNRPCP20-201ENST00000588011 210 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC112187.3-201ENST00000607844 408 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 BX649601.1-201ENST00000608264 572 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AL451054.3-201ENST00000611115 776 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC020658.4-201ENST00000613987 684 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 KDM5DP1-201ENST00000622542 298 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AL356094.1-201ENST00000624663 1212 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 HCCAT5-202ENST00000642127 1029 ntBASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP1Q96SZ6 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 SNORA35-201ENST00000386104 128 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 ZNF816-ZNF321P-201ENST00000391777 1252 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 FGF12-206ENST00000450716 768 ntTSL 5 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 NUTF2P4-201ENST00000458353 381 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 NPM1P28-201ENST00000492269 840 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AC104629.1-201ENST00000494226 508 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AC112203.1-201ENST00000506315 1020 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 POLB-211ENST00000521492 786 ntTSL 2 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms