Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 AC013439.1-201ENST00000449965 1239 ntBASIC8.59□□□□□ -1.03
LMO3Q8TAP4 RN7SL687P-201ENST00000480496 285 ntBASIC8.59□□□□□ -1.03
LMO3Q8TAP4 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 SNRPD2P1-201ENST00000489253 354 ntBASIC8.59□□□□□ -1.03
LMO3Q8TAP4 PTK2-241ENST00000522950 548 ntTSL 4 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 AP000445.1-201ENST00000526692 741 ntBASIC8.59□□□□□ -1.03
LMO3Q8TAP4 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 MIR3714-201ENST00000579507 65 ntBASIC8.59□□□□□ -1.03
LMO3Q8TAP4 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 RNVU1-19-201ENST00000613023 167 ntBASIC8.59□□□□□ -1.03
LMO3Q8TAP4 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 NLRP9P1-201ENST00000540920 2655 ntBASIC8.59□□□□□ -1.03
LMO3Q8TAP4 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC8.59□□□□□ -1.03
LMO3Q8TAP4 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
LMO3Q8TAP4 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC104083.1-201ENST00000569449 2615 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 DET1-202ENST00000444300 2154 ntTSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 RNU1-47P-201ENST00000362966 163 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 FAM177A1P1-201ENST00000503598 473 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC091839.1-201ENST00000513087 269 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 LINC02544-201ENST00000564830 544 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 DNM1P33-201ENST00000565222 270 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 MIR4682-201ENST00000580643 80 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC140658.6-201ENST00000603958 201 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 U1.22-201ENST00000605806 164 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 ELMO2P1-202ENST00000614283 794 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AL589935.2-201ENST00000616471 1231 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AC108724.2-201ENST00000634593 290 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 MIR3120-201ENST00000636555 81 ntBASIC8.58□□□□□ -1.04
LMO3Q8TAP4 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.58□□□□□ -1.04
LMO3Q8TAP4 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
LMO3Q8TAP4 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LMO3Q8TAP4 AC068860.1-201ENST00000623701 3736 ntBASIC8.57□□□□□ -1.04
LMO3Q8TAP4 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.57□□□□□ -1.04
LMO3Q8TAP4 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
LMO3Q8TAP4 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LMO3Q8TAP4 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LMO3Q8TAP4 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms