Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC004839.1-201ENST00000610269 501 ntBASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 RN7SL820P-201ENST00000616437 299 ntBASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 EIF5P2-201ENST00000618904 1035 ntBASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 AL355480.4-201ENST00000626823 69 ntBASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 MIR193BHG-210ENST00000641327 515 ntBASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
NPIPA3F8WFD2 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC093768.1-201ENST00000505987 2173 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 PID1-201ENST00000354069 839 ntTSL 3 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 PPIAP25-201ENST00000420177 540 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 NEFLP1-201ENST00000436364 984 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 RPS3AP29-201ENST00000437728 769 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC005099.1-201ENST00000442083 610 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 SNX18P8-201ENST00000455120 874 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC074051.1-201ENST00000470389 781 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 RN7SL333P-201ENST00000476398 297 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC105910.1-201ENST00000482585 483 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AL031864.2-201ENST00000498507 350 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC138356.2-201ENST00000521192 667 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC073913.2-201ENST00000541512 145 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 HERC2P5-201ENST00000562687 3825 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC026401.2-201ENST00000576454 503 ntTSL 3 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AP005229.1-201ENST00000592198 810 ntTSL 3 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC005616.1-201ENST00000592931 579 ntTSL 4 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC073534.1-201ENST00000598671 1056 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 RN7SL760P-201ENST00000607344 270 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AC074029.3-201ENST00000618623 312 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AL109806.1-201ENST00000623967 1248 ntBASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPIPA3F8WFD2 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC010200.1-201ENST00000547380 1454 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AL356289.3-201ENST00000640049 2669 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms