Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SOX5-213ENST00000541847 758 ntTSL 3 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 BANF2-205ENST00000545418 360 ntTSL 3 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 FOXG1-AS1-201ENST00000546560 538 ntTSL 3 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 AC010809.2-201ENST00000560404 964 ntTSL 5 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 MIR3680-2-201ENST00000578247 87 ntBASIC7.62□□□□□ -1.19
SNX18Q96RF0 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 MIR3680-1-201ENST00000581433 87 ntBASIC7.62□□□□□ -1.19
SNX18Q96RF0 AC010385.2-201ENST00000603743 490 ntBASIC7.62□□□□□ -1.19
SNX18Q96RF0 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 FAM238C-205ENST00000640641 391 ntBASIC7.62□□□□□ -1.19
SNX18Q96RF0 OR3A1-201ENST00000323404 1650 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SNX18Q96RF0 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SNX18Q96RF0 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNX18Q96RF0 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNX18Q96RF0 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNX18Q96RF0 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
SNX18Q96RF0 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNX18Q96RF0 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNX18Q96RF0 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 SND1-IT1-201ENST00000623342 2481 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 SOX5-203ENST00000396007 1379 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC026356.1-201ENST00000622688 1357 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 OR10K1-201ENST00000289451 1073 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 LINC00272-201ENST00000367563 740 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 CNOT4P1-201ENST00000417432 1199 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 VDAC1P2-201ENST00000423609 850 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC099066.1-201ENST00000428148 534 ntTSL 5 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC092098.1-201ENST00000429245 874 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 CDK7P1-201ENST00000434574 693 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 ZNF341-AS1-203ENST00000443171 642 ntTSL 2 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 CYP4A22-AS1-201ENST00000444042 921 ntTSL 5 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 RPL7L1P11-201ENST00000446092 721 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 RBMY2OP-201ENST00000447105 810 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 AL450023.2-201ENST00000453276 545 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 TUBB4BP2-201ENST00000454125 798 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 GAPDHP47-201ENST00000489113 999 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 PTPRG-AS1-209ENST00000495542 502 ntTSL 4 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AF186996.2-201ENST00000508347 907 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC104117.2-201ENST00000523735 515 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC079031.2-201ENST00000537742 615 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC110027.1-201ENST00000557753 403 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AL591926.6-201ENST00000617375 415 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC087821.1-201ENST00000623639 567 ntBASIC7.61□□□□□ -1.19
SNX18Q96RF0 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNX18Q96RF0 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
SNX18Q96RF0 AC068044.1-201ENST00000441585 1978 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 LINC01800-201ENST00000445865 1977 ntTSL 2 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms