Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 AC139085.1-201ENST00000582716 182 ntBASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 AC126474.1-201ENST00000623555 1293 ntBASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 CFTRP2-201ENST00000634304 199 ntBASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 AC010200.1-201ENST00000547380 1454 ntBASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 AC011453.1-201ENST00000597619 2239 ntBASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 LINC02533-201ENST00000563079 2272 ntTSL 4 BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 OXNAD1-207ENST00000606098 2288 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SYCE2Q6PIF2 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 ZNF738-202ENST00000380870 1142 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AMELY-202ENST00000383036 621 ntTSL 5 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 MIR181C-201ENST00000384881 110 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 MIR106B-201ENST00000385301 82 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AC084880.1-201ENST00000392530 545 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 OR7E91P-201ENST00000400027 866 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 RN7SKP42-201ENST00000410913 300 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AL049758.1-201ENST00000423154 397 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AL136452.1-201ENST00000448495 439 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 OR7A15P-201ENST00000449848 1009 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AC119428.2-201ENST00000449958 850 ntTSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 OR10J9P-201ENST00000511932 987 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 RNF185-AS1-201ENST00000526089 353 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AL691432.1-202ENST00000597891 502 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 OR7A18P-201ENST00000600416 277 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 OR6L2P-201ENST00000608207 925 ntBASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 ZNF565-201ENST00000304116 2023 ntAPPRIS P2 TSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
SYCE2Q6PIF2 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 U3.1-201ENST00000362500 215 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 RNA5SP483-201ENST00000363431 118 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 RNA5SP297-201ENST00000391029 113 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 SSR1P1-201ENST00000407630 814 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 EEF1A1P11-201ENST00000415278 1389 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 RPL15P1-201ENST00000439981 600 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AC108039.1-201ENST00000456719 609 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AC080188.1-201ENST00000491923 567 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AC044787.1-201ENST00000497325 792 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 IGLV1-41-201ENST00000519790 406 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AC138356.2-201ENST00000521192 667 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AP002765.1-201ENST00000528675 1507 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 RN7SL42P-201ENST00000579786 294 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 VDAC1P5-201ENST00000603132 844 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AC010680.2-201ENST00000603521 2117 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AP001002.2-201ENST00000625137 386 ntBASIC8.67□□□□□ -1.02
SYCE2Q6PIF2 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms