Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 CEP83-AS1-201ENST00000623122 2482 ntBASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC01558Q9Y6Z2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 PKD1P1-201ENST00000458669 6805 ntBASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms