Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 AC026471.6-201ENST00000622954 1905 ntBASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 AC116050.2-201ENST00000612102 1779 ntBASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 AC012618.2-201ENST00000428058 849 ntBASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 C2orf69P4-201ENST00000565394 541 ntBASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHGA9Q9Y5G4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA9Q9Y5G4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 AC233702.5-201ENST00000584107 538 ntBASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 REXO1L12P-201ENST00000622156 912 ntBASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms