Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB6Q9Y5F9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHGB6Q9Y5F9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PCDHGB6Q9Y5F9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB6Q9Y5F9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB6Q9Y5F9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB6Q9Y5F9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB6Q9Y5F9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PCDHGB6Q9Y5F9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB6Q9Y5F9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 BX276092.2-201ENST00000417668 665 ntBASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 FAM21FP-204ENST00000608637 956 ntBASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 AC100791.3-201ENST00000617619 330 ntBASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGB6Q9Y5F9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 AC245052.3-201ENST00000450182 901 ntBASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 FAM201B-201ENST00000458407 597 ntBASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 AC097658.1-201ENST00000475555 843 ntBASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 MYC-209ENST00000641252 345 ntBASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGB6Q9Y5F9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 AC066615.1-201ENST00000640911 628 ntBASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB6Q9Y5F9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 AC091799.1-201ENST00000422823 811 ntBASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 CDV3P1-201ENST00000471403 739 ntBASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGB6Q9Y5F9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms