Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 AC012414.1-201ENST00000556676 535 ntBASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 AC120498.10-201ENST00000621827 505 ntBASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 TMEM179-206ENST00000616017 1645 ntBASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 AC098818.2-201ENST00000564925 2320 ntBASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D4Q9Y2X8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 KRT87P-202ENST00000534226 1464 ntBASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 TPRG1LP1-201ENST00000598702 760 ntBASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.06□□□□□ -0.16
UBE2D4Q9Y2X8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 AC138907.5-202ENST00000569484 235 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms