Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 CD70-202ENST00000423145 881 ntTSL 2 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 MIR940-201ENST00000401276 94 ntBASIC8.43□□□□□ -1.06
MACF1Q9UPN3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 AC104819.1-201ENST00000504587 486 ntBASIC8.43□□□□□ -1.06
MACF1Q9UPN3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
MACF1Q9UPN3 RER1-204ENST00000378518 522 ntTSL 3 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 KRT18P58-201ENST00000527480 1120 ntBASIC8.42□□□□□ -1.06
MACF1Q9UPN3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 BX640515.1-201ENST00000617215 977 ntBASIC8.42□□□□□ -1.06
MACF1Q9UPN3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 FSCN1P1-201ENST00000568912 1481 ntBASIC8.42□□□□□ -1.06
MACF1Q9UPN3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 HNRNPA1P28-201ENST00000424481 961 ntBASIC8.42□□□□□ -1.06
MACF1Q9UPN3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 AC106730.1-201ENST00000566722 1090 ntBASIC8.42□□□□□ -1.06
MACF1Q9UPN3 AC011498.5-201ENST00000592027 486 ntBASIC8.42□□□□□ -1.06
MACF1Q9UPN3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC8.42□□□□□ -1.06
MACF1Q9UPN3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 HLA-V-201ENST00000429037 534 ntBASIC8.41□□□□□ -1.06
MACF1Q9UPN3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms