Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC061975.6-201ENST00000579045 1553 ntBASIC19.16■□□□□ 0.66
LHX6Q9UPM6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 FAM197Y1-201ENST00000421178 764 ntBASIC19.16■□□□□ 0.66
LHX6Q9UPM6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 AF186192.3-201ENST00000583427 947 ntBASIC19.16■□□□□ 0.66
LHX6Q9UPM6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX6Q9UPM6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 C9orf163-202ENST00000624034 2573 ntBASIC19.15■□□□□ 0.66
LHX6Q9UPM6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 DUSP5P1-201ENST00000441325 1139 ntBASIC19.15■□□□□ 0.66
LHX6Q9UPM6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 AC105020.6-201ENST00000621523 1217 ntBASIC19.15■□□□□ 0.66
LHX6Q9UPM6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 AC139530.1-201ENST00000575312 1977 ntBASIC19.15■□□□□ 0.66
LHX6Q9UPM6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LHX6Q9UPM6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LHX6Q9UPM6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.14■□□□□ 0.66
LHX6Q9UPM6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LHX6Q9UPM6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 GPALPP1-207ENST00000611650 899 ntBASIC19.14■□□□□ 0.65
LHX6Q9UPM6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LHX6Q9UPM6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 AC091799.1-201ENST00000422823 811 ntBASIC19.13■□□□□ 0.65
LHX6Q9UPM6 LIN28AP1-201ENST00000429574 405 ntBASIC19.13■□□□□ 0.65
LHX6Q9UPM6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 RN7SL602P-201ENST00000578326 324 ntBASIC19.13■□□□□ 0.65
LHX6Q9UPM6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX6Q9UPM6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 ATP5G1P1-201ENST00000448724 379 ntBASIC19.12■□□□□ 0.65
LHX6Q9UPM6 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LHX6Q9UPM6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms