Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 AC073314.1-201ENST00000568729 2216 ntBASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 ITM2C-210ENST00000620962 501 ntBASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.45■□□□□ 0.86
NCKIPSDQ9NZQ3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 KRT18P29-201ENST00000397031 1267 ntBASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 RARRES2P4-201ENST00000514074 484 ntBASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NCKIPSDQ9NZQ3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCKIPSDQ9NZQ3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.42■□□□□ 0.86
NCKIPSDQ9NZQ3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 AC010980.2-201ENST00000587099 1412 ntBASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NCKIPSDQ9NZQ3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NCKIPSDQ9NZQ3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCKIPSDQ9NZQ3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCKIPSDQ9NZQ3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms