Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 AC006970.2-201ENST00000450065 779 ntBASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAP1Q9NZP6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAP1Q9NZP6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAP1Q9NZP6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 AL050303.2-201ENST00000619798 666 ntBASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 AC010536.3-201ENST00000620306 533 ntBASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 AC231657.2-201ENST00000624556 255 ntBASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAP1Q9NZP6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms