Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 IRS3P-201ENST00000223076 1006 ntBASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CDC42SE2Q9NRR3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 KRT8P36-201ENST00000489121 1440 ntBASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 SLC7A5P2-201ENST00000553010 536 ntBASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42SE2Q9NRR3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 AC125437.2-201ENST00000625180 2167 ntBASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42SE2Q9NRR3 DPP3P2-201ENST00000416030 1696 ntBASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 AC116562.4-201ENST00000641316 2276 ntBASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC42SE2Q9NRR3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms