Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 AC138907.5-202ENST00000569484 235 ntBASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PCDHB16Q9NRJ7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHB16Q9NRJ7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHB16Q9NRJ7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PCDHB16Q9NRJ7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHB16Q9NRJ7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 AC027702.1-201ENST00000563810 1770 ntBASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB16Q9NRJ7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 AC105265.2-201ENST00000467189 838 ntBASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHB16Q9NRJ7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB16Q9NRJ7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms