Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3AQ9NNX9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VCX3AQ9NNX9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3AQ9NNX9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3AQ9NNX9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.92■□□□□ 0.62
VCX3AQ9NNX9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3AQ9NNX9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.92■□□□□ 0.62
VCX3AQ9NNX9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3AQ9NNX9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VCX3AQ9NNX9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 HTR7P1-202ENST00000624664 4411 ntBASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VCX3AQ9NNX9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
VCX3AQ9NNX9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
VCX3AQ9NNX9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.89■□□□□ 0.62
VCX3AQ9NNX9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 AL034346.1-201ENST00000568244 1277 ntBASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 AL031602.1-201ENST00000633169 911 ntBASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCX3AQ9NNX9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCX3AQ9NNX9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
VCX3AQ9NNX9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms