Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A1Q9HD20 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP13A1Q9HD20 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 AL121603.2-201ENST00000557373 2117 ntBASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ATP13A1Q9HD20 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
ATP13A1Q9HD20 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP13A1Q9HD20 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP13A1Q9HD20 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
ATP13A1Q9HD20 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP13A1Q9HD20 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 FEM1AP1-201ENST00000431297 1995 ntBASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 C2orf69P4-201ENST00000565394 541 ntBASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP13A1Q9HD20 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP13A1Q9HD20 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 CD99P1-205ENST00000527459 561 ntBASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP13A1Q9HD20 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 RNA5SP413-201ENST00000516373 109 ntBASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ATP13A1Q9HD20 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP13A1Q9HD20 AL157384.1-201ENST00000445995 2473 ntBASIC20.72■□□□□ 0.91
ATP13A1Q9HD20 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP13A1Q9HD20 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms