Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPN1Q9HCN4 AC093503.3-201ENST00000624917 2352 ntBASIC17.2■□□□□ 0.34
GPN1Q9HCN4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 DUX4L18-201ENST00000553347 1267 ntBASIC17.19■□□□□ 0.34
GPN1Q9HCN4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GPN1Q9HCN4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 AP006587.3-201ENST00000525742 1516 ntBASIC17.18■□□□□ 0.34
GPN1Q9HCN4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 KRT18P60-201ENST00000312876 1297 ntBASIC17.18■□□□□ 0.34
GPN1Q9HCN4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPN1Q9HCN4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 AC137630.3-201ENST00000607245 391 ntBASIC17.17■□□□□ 0.34
GPN1Q9HCN4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
GPN1Q9HCN4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
GPN1Q9HCN4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms