Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.61■■□□□ 1.05
VRTNQ9H8Y1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRTNQ9H8Y1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
VRTNQ9H8Y1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRTNQ9H8Y1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRTNQ9H8Y1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRTNQ9H8Y1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRTNQ9H8Y1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRTNQ9H8Y1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 AC005829.2-201ENST00000571422 1056 ntBASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 DPP3P2-201ENST00000416030 1696 ntBASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRTNQ9H8Y1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 PNMA6B-201ENST00000538162 1200 ntBASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
VRTNQ9H8Y1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VRTNQ9H8Y1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.58■■□□□ 1.04
VRTNQ9H8Y1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.58■■□□□ 1.04
VRTNQ9H8Y1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 AC092368.3-202ENST00000574180 1591 ntBASIC21.57■■□□□ 1.04
VRTNQ9H8Y1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 AL162377.1-201ENST00000618844 1793 ntBASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 UNC93B5-201ENST00000530315 699 ntBASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 AL031963.3-201ENST00000606441 850 ntBASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VRTNQ9H8Y1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms