Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
NDST4Q9H3R1 AL591742.1-201ENST00000604433 565 ntBASIC22.08■■□□□ 1.13
NDST4Q9H3R1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.08■■□□□ 1.13
NDST4Q9H3R1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
NDST4Q9H3R1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
NDST4Q9H3R1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NDST4Q9H3R1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
NDST4Q9H3R1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NDST4Q9H3R1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
NDST4Q9H3R1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
NDST4Q9H3R1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
NDST4Q9H3R1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
NDST4Q9H3R1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NDST4Q9H3R1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
NDST4Q9H3R1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
NDST4Q9H3R1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.07■■□□□ 1.12
NDST4Q9H3R1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.06■■□□□ 1.12
NDST4Q9H3R1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 AC087633.2-202ENST00000565166 1439 ntBASIC22.05■■□□□ 1.12
NDST4Q9H3R1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.05■■□□□ 1.12
NDST4Q9H3R1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.04■■□□□ 1.12
NDST4Q9H3R1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 PGM5P4-201ENST00000421970 445 ntBASIC22.03■■□□□ 1.12
NDST4Q9H3R1 KRT18P11-201ENST00000435214 1283 ntBASIC22.03■■□□□ 1.12
NDST4Q9H3R1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.03■■□□□ 1.12
NDST4Q9H3R1 AC007322.4-201ENST00000509611 723 ntBASIC22.03■■□□□ 1.12
NDST4Q9H3R1 AL162412.1-201ENST00000567129 965 ntBASIC22.03■■□□□ 1.12
NDST4Q9H3R1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms