Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NELFAQ9H3P2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NELFAQ9H3P2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NELFAQ9H3P2 LINC01006-201ENST00000333319 2292 ntBASIC18.03■□□□□ 0.48
NELFAQ9H3P2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 AF201337.1-201ENST00000520239 748 ntBASIC18.03■□□□□ 0.48
NELFAQ9H3P2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 MIR2861-201ENST00000636310 90 ntBASIC18.03■□□□□ 0.48
NELFAQ9H3P2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.03■□□□□ 0.48
NELFAQ9H3P2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 AL512625.2-201ENST00000417533 625 ntBASIC18.02■□□□□ 0.48
NELFAQ9H3P2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 AC083906.2-201ENST00000511578 360 ntBASIC18.02■□□□□ 0.48
NELFAQ9H3P2 AC105036.2-201ENST00000569468 176 ntBASIC18.02■□□□□ 0.48
NELFAQ9H3P2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.02■□□□□ 0.48
NELFAQ9H3P2 AC008694.1-202ENST00000636953 945 ntBASIC18.02■□□□□ 0.48
NELFAQ9H3P2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.02■□□□□ 0.47
NELFAQ9H3P2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NELFAQ9H3P2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NELFAQ9H3P2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.02■□□□□ 0.47
NELFAQ9H3P2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NELFAQ9H3P2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NELFAQ9H3P2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.02■□□□□ 0.47
NELFAQ9H3P2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NELFAQ9H3P2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 GPX1P1-201ENST00000388829 606 ntBASIC18.01■□□□□ 0.47
NELFAQ9H3P2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 AC104771.1-201ENST00000603335 964 ntBASIC18.01■□□□□ 0.47
NELFAQ9H3P2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
NELFAQ9H3P2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18■□□□□ 0.47
NELFAQ9H3P2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NELFAQ9H3P2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18■□□□□ 0.47
NELFAQ9H3P2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18■□□□□ 0.47
NELFAQ9H3P2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
NELFAQ9H3P2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NELFAQ9H3P2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NELFAQ9H3P2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NELFAQ9H3P2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18■□□□□ 0.47
NELFAQ9H3P2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFAQ9H3P2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFAQ9H3P2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFAQ9H3P2 ID1-201ENST00000376105 1233 ntBASIC18■□□□□ 0.47
NELFAQ9H3P2 HLA-L-209ENST00000420110 1011 ntBASIC18■□□□□ 0.47
NELFAQ9H3P2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NELFAQ9H3P2 TSPY6P-201ENST00000448518 926 ntBASIC18■□□□□ 0.47
NELFAQ9H3P2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18■□□□□ 0.47
NELFAQ9H3P2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NELFAQ9H3P2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18■□□□□ 0.47
NELFAQ9H3P2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18■□□□□ 0.47
NELFAQ9H3P2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18■□□□□ 0.47
NELFAQ9H3P2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18■□□□□ 0.47
NELFAQ9H3P2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18■□□□□ 0.47
NELFAQ9H3P2 AC020907.5-201ENST00000624372 1936 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms