Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A1Q9H2H9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC38A1Q9H2H9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A1Q9H2H9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A1Q9H2H9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A1Q9H2H9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A1Q9H2H9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A1Q9H2H9 CYP21A1P-202ENST00000354927 1481 ntBASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 AC087633.2-202ENST00000565166 1439 ntBASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 AFG3L1P-217ENST00000557444 2447 ntBASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 AC006015.1-201ENST00000429970 570 ntBASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A1Q9H2H9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
SLC38A1Q9H2H9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.77■□□□□ 0.59
SLC38A1Q9H2H9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC38A1Q9H2H9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 TCF3P1-201ENST00000423021 1937 ntBASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 DPP3P2-201ENST00000416030 1696 ntBASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 AC016769.1-201ENST00000409132 1010 ntBASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 CNN2P6-201ENST00000439038 900 ntBASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 AL356652.1-201ENST00000615962 565 ntBASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A1Q9H2H9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 PGM5P4-201ENST00000421970 445 ntBASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 DUX4L16-201ENST00000555130 1264 ntBASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A1Q9H2H9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A1Q9H2H9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A1Q9H2H9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms