Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC019069.1-201ENST00000610008 1333 ntBASIC22.24■■□□□ 1.15
VPS16Q9H269 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS16Q9H269 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS16Q9H269 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS16Q9H269 KRT8P36-201ENST00000489121 1440 ntBASIC22.23■■□□□ 1.15
VPS16Q9H269 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS16Q9H269 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS16Q9H269 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.23■■□□□ 1.15
VPS16Q9H269 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS16Q9H269 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS16Q9H269 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS16Q9H269 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.23■■□□□ 1.15
VPS16Q9H269 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS16Q9H269 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS16Q9H269 DPP3P2-201ENST00000416030 1696 ntBASIC22.23■■□□□ 1.15
VPS16Q9H269 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS16Q9H269 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS16Q9H269 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS16Q9H269 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS16Q9H269 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
VPS16Q9H269 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS16Q9H269 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS16Q9H269 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.22■■□□□ 1.15
VPS16Q9H269 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS16Q9H269 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.22■■□□□ 1.15
VPS16Q9H269 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VPS16Q9H269 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.22■■□□□ 1.15
VPS16Q9H269 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.22■■□□□ 1.15
VPS16Q9H269 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.22■■□□□ 1.15
VPS16Q9H269 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.22■■□□□ 1.15
VPS16Q9H269 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.22■■□□□ 1.15
VPS16Q9H269 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
VPS16Q9H269 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VPS16Q9H269 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS16Q9H269 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
VPS16Q9H269 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.22■■□□□ 1.15
VPS16Q9H269 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.22■■□□□ 1.15
VPS16Q9H269 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.21■■□□□ 1.15
VPS16Q9H269 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
VPS16Q9H269 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 ZNRF2P3-201ENST00000424200 374 ntBASIC22.21■■□□□ 1.15
VPS16Q9H269 SLC7A5P1-201ENST00000568957 537 ntBASIC22.21■■□□□ 1.15
VPS16Q9H269 KRT18P61-201ENST00000585825 1298 ntBASIC22.21■■□□□ 1.15
VPS16Q9H269 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.21■■□□□ 1.15
VPS16Q9H269 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.21■■□□□ 1.15
VPS16Q9H269 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.21■■□□□ 1.15
VPS16Q9H269 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.21■■□□□ 1.15
VPS16Q9H269 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.21■■□□□ 1.15
VPS16Q9H269 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.21■■□□□ 1.15
VPS16Q9H269 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
VPS16Q9H269 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS16Q9H269 AC125437.2-201ENST00000625180 2167 ntBASIC22.21■■□□□ 1.15
VPS16Q9H269 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.21■■□□□ 1.15
VPS16Q9H269 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
VPS16Q9H269 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.2■■□□□ 1.15
VPS16Q9H269 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
VPS16Q9H269 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.2■■□□□ 1.14
VPS16Q9H269 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.2■■□□□ 1.14
VPS16Q9H269 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
VPS16Q9H269 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.2■■□□□ 1.14
VPS16Q9H269 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.2■■□□□ 1.14
VPS16Q9H269 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
VPS16Q9H269 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
VPS16Q9H269 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.2■■□□□ 1.14
VPS16Q9H269 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VPS16Q9H269 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS16Q9H269 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.19■■□□□ 1.14
VPS16Q9H269 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS16Q9H269 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS16Q9H269 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS16Q9H269 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VPS16Q9H269 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.19■■□□□ 1.14
VPS16Q9H269 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VPS16Q9H269 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.19■■□□□ 1.14
VPS16Q9H269 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.19■■□□□ 1.14
VPS16Q9H269 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.19■■□□□ 1.14
VPS16Q9H269 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.19■■□□□ 1.14
VPS16Q9H269 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms