Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MED28Q9H204 AC092720.2-201ENST00000602388 1665 ntBASIC17.28■□□□□ 0.36
MED28Q9H204 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.28■□□□□ 0.36
MED28Q9H204 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.28■□□□□ 0.36
MED28Q9H204 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MED28Q9H204 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MED28Q9H204 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MED28Q9H204 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MED28Q9H204 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MED28Q9H204 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MED28Q9H204 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MED28Q9H204 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.27■□□□□ 0.36
MED28Q9H204 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.27■□□□□ 0.36
MED28Q9H204 AC019171.1-201ENST00000601251 1056 ntBASIC17.27■□□□□ 0.36
MED28Q9H204 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.27■□□□□ 0.36
MED28Q9H204 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MED28Q9H204 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.27■□□□□ 0.36
MED28Q9H204 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MED28Q9H204 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
MED28Q9H204 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MED28Q9H204 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.27■□□□□ 0.35
MED28Q9H204 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.35
MED28Q9H204 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.27■□□□□ 0.35
MED28Q9H204 AC020916.1-201ENST00000587762 1774 ntBASIC17.27■□□□□ 0.35
MED28Q9H204 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MED28Q9H204 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
MED28Q9H204 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MED28Q9H204 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.27■□□□□ 0.35
MED28Q9H204 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.27■□□□□ 0.35
MED28Q9H204 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MED28Q9H204 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MED28Q9H204 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.27■□□□□ 0.35
MED28Q9H204 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MED28Q9H204 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MED28Q9H204 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
MED28Q9H204 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
MED28Q9H204 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MED28Q9H204 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.26■□□□□ 0.35
MED28Q9H204 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
MED28Q9H204 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MED28Q9H204 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MED28Q9H204 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MED28Q9H204 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MED28Q9H204 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MED28Q9H204 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MED28Q9H204 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.26■□□□□ 0.35
MED28Q9H204 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MED28Q9H204 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.26■□□□□ 0.35
MED28Q9H204 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.26■□□□□ 0.35
MED28Q9H204 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.26■□□□□ 0.35
MED28Q9H204 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MED28Q9H204 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MED28Q9H204 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MED28Q9H204 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MED28Q9H204 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.26■□□□□ 0.35
MED28Q9H204 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
MED28Q9H204 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
MED28Q9H204 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.26■□□□□ 0.35
MED28Q9H204 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MED28Q9H204 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
MED28Q9H204 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MED28Q9H204 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.25■□□□□ 0.35
MED28Q9H204 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.25■□□□□ 0.35
MED28Q9H204 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
MED28Q9H204 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 Z82202.1-201ENST00000623446 1880 ntBASIC17.25■□□□□ 0.35
MED28Q9H204 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.25■□□□□ 0.35
MED28Q9H204 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.25■□□□□ 0.35
MED28Q9H204 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.25■□□□□ 0.35
MED28Q9H204 AL138781.2-201ENST00000617896 1843 ntBASIC17.25■□□□□ 0.35
MED28Q9H204 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
MED28Q9H204 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MED28Q9H204 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
MED28Q9H204 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms