Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 CROCCP5-201ENST00000436658 830 ntBASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 AC011767.1-201ENST00000617410 1153 ntBASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 MIR2861-201ENST00000636310 90 ntBASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 KRT16P2-201ENST00000414673 1423 ntBASIC20.87■□□□□ 0.93
FOXP3Q9BZS1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 AC245052.3-201ENST00000450182 901 ntBASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 AC104771.1-201ENST00000603335 964 ntBASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXP3Q9BZS1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 SMG8-203ENST00000578922 2178 ntBASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXP3Q9BZS1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.84■□□□□ 0.93
FOXP3Q9BZS1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.83■□□□□ 0.93
FOXP3Q9BZS1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms