Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 MIR935-201ENST00000401179 91 ntBASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 PGM5P4-201ENST00000421970 445 ntBASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 MFSD11-216ENST00000590393 1141 ntBASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 AC011767.1-201ENST00000617410 1153 ntBASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRIM54Q9BYV2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 AC020907.5-201ENST00000624372 1936 ntBASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 AC092720.2-201ENST00000602388 1665 ntBASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
TRIM54Q9BYV2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM54Q9BYV2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 AC022517.1-201ENST00000592429 346 ntBASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM54Q9BYV2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM54Q9BYV2 DUX4L16-201ENST00000555130 1264 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms