Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 KRT18P6-201ENST00000555540 1265 ntBASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 AC092118.2-201ENST00000613495 667 ntBASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF1Q9BSM1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 AC116050.2-201ENST00000612102 1779 ntBASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 AL355472.2-201ENST00000422958 438 ntBASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 AC073210.2-201ENST00000430369 194 ntBASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 AF106564.1-201ENST00000607058 2553 ntBASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF1Q9BSM1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.91■□□□□ 0.3
PCGF1Q9BSM1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF1Q9BSM1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCGF1Q9BSM1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCGF1Q9BSM1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCGF1Q9BSM1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PCGF1Q9BSM1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF1Q9BSM1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms