Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 AP001160.3-201ENST00000601484 763 ntBASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 DUX4L6-201ENST00000626483 1275 ntBASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 DUX4L1-201ENST00000627662 1275 ntBASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 DUX4L8-201ENST00000629013 1275 ntBASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 DUX4L3-201ENST00000630187 1275 ntBASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 DUX4L7-201ENST00000630678 1275 ntBASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 DUX4L5-201ENST00000630834 1275 ntBASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 AC116562.4-201ENST00000641316 2276 ntBASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 AC027612.3-201ENST00000413684 1047 ntBASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HDHD3Q9BSH5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 DPP3P2-201ENST00000416030 1696 ntBASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.06■□□□□ 0.32
HDHD3Q9BSH5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 LINC02228-203ENST00000641970 1355 ntBASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HDHD3Q9BSH5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms