Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.78■□□□□ 0.76
NPAS2Q99743 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 RAP2CP1-201ENST00000605103 478 ntBASIC19.78■□□□□ 0.76
NPAS2Q99743 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NPAS2Q99743 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NPAS2Q99743 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.78■□□□□ 0.76
NPAS2Q99743 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS2Q99743 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.77■□□□□ 0.76
NPAS2Q99743 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NPAS2Q99743 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.77■□□□□ 0.76
NPAS2Q99743 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NPAS2Q99743 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 CDCA4P2-201ENST00000441182 718 ntBASIC19.77■□□□□ 0.76
NPAS2Q99743 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.77■□□□□ 0.76
NPAS2Q99743 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.77■□□□□ 0.76
NPAS2Q99743 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.77■□□□□ 0.76
NPAS2Q99743 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NPAS2Q99743 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NPAS2Q99743 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPAS2Q99743 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
NPAS2Q99743 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.77■□□□□ 0.75
NPAS2Q99743 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
NPAS2Q99743 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NPAS2Q99743 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NPAS2Q99743 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NPAS2Q99743 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS2Q99743 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS2Q99743 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS2Q99743 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS2Q99743 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.76■□□□□ 0.75
NPAS2Q99743 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
NPAS2Q99743 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NPAS2Q99743 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS2Q99743 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS2Q99743 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
NPAS2Q99743 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.76■□□□□ 0.75
NPAS2Q99743 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.76■□□□□ 0.75
NPAS2Q99743 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPAS2Q99743 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NPAS2Q99743 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.76■□□□□ 0.75
NPAS2Q99743 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.76■□□□□ 0.75
NPAS2Q99743 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NPAS2Q99743 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NPAS2Q99743 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPAS2Q99743 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPAS2Q99743 AC073111.5-205ENST00000641717 521 ntBASIC19.75■□□□□ 0.75
NPAS2Q99743 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.75■□□□□ 0.75
NPAS2Q99743 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.75■□□□□ 0.75
NPAS2Q99743 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPAS2Q99743 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
NPAS2Q99743 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.75■□□□□ 0.75
NPAS2Q99743 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPAS2Q99743 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPAS2Q99743 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NPAS2Q99743 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.75■□□□□ 0.75
NPAS2Q99743 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPAS2Q99743 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.74■□□□□ 0.75
NPAS2Q99743 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS2Q99743 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS2Q99743 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS2Q99743 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.74■□□□□ 0.75
NPAS2Q99743 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.74■□□□□ 0.75
NPAS2Q99743 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS2Q99743 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS2Q99743 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS2Q99743 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.74■□□□□ 0.75
NPAS2Q99743 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.74■□□□□ 0.75
NPAS2Q99743 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS2Q99743 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.74■□□□□ 0.75
NPAS2Q99743 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS2Q99743 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPAS2Q99743 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
NPAS2Q99743 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS2Q99743 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS2Q99743 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS2Q99743 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS2Q99743 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS2Q99743 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
NPAS2Q99743 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPAS2Q99743 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NPAS2Q99743 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.73■□□□□ 0.75
NPAS2Q99743 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms