Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NDNQ99608 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NDNQ99608 KRT18P5-201ENST00000436075 1291 ntBASIC20.27■□□□□ 0.84
NDNQ99608 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.27■□□□□ 0.84
NDNQ99608 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NDNQ99608 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDNQ99608 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.27■□□□□ 0.84
NDNQ99608 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.27■□□□□ 0.84
NDNQ99608 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
NDNQ99608 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.27■□□□□ 0.84
NDNQ99608 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDNQ99608 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
NDNQ99608 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NDNQ99608 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.27■□□□□ 0.83
NDNQ99608 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NDNQ99608 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
NDNQ99608 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDNQ99608 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDNQ99608 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NDNQ99608 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDNQ99608 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDNQ99608 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDNQ99608 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDNQ99608 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDNQ99608 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDNQ99608 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.26■□□□□ 0.83
NDNQ99608 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDNQ99608 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.26■□□□□ 0.83
NDNQ99608 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDNQ99608 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.26■□□□□ 0.83
NDNQ99608 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDNQ99608 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDNQ99608 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.25■□□□□ 0.83
NDNQ99608 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDNQ99608 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDNQ99608 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NDNQ99608 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.25■□□□□ 0.83
NDNQ99608 AC026271.2-201ENST00000428091 497 ntBASIC20.25■□□□□ 0.83
NDNQ99608 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.25■□□□□ 0.83
NDNQ99608 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
NDNQ99608 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.25■□□□□ 0.83
NDNQ99608 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NDNQ99608 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NDNQ99608 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
NDNQ99608 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDNQ99608 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDNQ99608 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.25■□□□□ 0.83
NDNQ99608 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
NDNQ99608 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.24■□□□□ 0.83
NDNQ99608 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 AC099778.1-201ENST00000568593 1911 ntBASIC20.24■□□□□ 0.83
NDNQ99608 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.24■□□□□ 0.83
NDNQ99608 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NDNQ99608 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.24■□□□□ 0.83
NDNQ99608 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.24■□□□□ 0.83
NDNQ99608 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NDNQ99608 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.24■□□□□ 0.83
NDNQ99608 AC137761.2-201ENST00000561729 223 ntBASIC20.24■□□□□ 0.83
NDNQ99608 RARRES2P6-201ENST00000567333 442 ntBASIC20.24■□□□□ 0.83
NDNQ99608 AC145350.3-201ENST00000569033 163 ntBASIC20.24■□□□□ 0.83
NDNQ99608 AC010536.3-201ENST00000620306 533 ntBASIC20.24■□□□□ 0.83
NDNQ99608 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.24■□□□□ 0.83
NDNQ99608 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
NDNQ99608 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NDNQ99608 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.24■□□□□ 0.83
NDNQ99608 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDNQ99608 SMG8-203ENST00000578922 2178 ntBASIC20.24■□□□□ 0.83
NDNQ99608 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.23■□□□□ 0.83
NDNQ99608 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.23■□□□□ 0.83
NDNQ99608 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NDNQ99608 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
NDNQ99608 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDNQ99608 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms