Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40CQ96S21 TNXA-203ENST00000507684 2038 ntBASIC16.4■□□□□ 0.22
RAB40CQ96S21 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAB40CQ96S21 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 BX842568.3-201ENST00000418104 571 ntBASIC16.39■□□□□ 0.21
RAB40CQ96S21 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40CQ96S21 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40CQ96S21 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB40CQ96S21 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RAB40CQ96S21 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
RAB40CQ96S21 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RAB40CQ96S21 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB40CQ96S21 EEF1DP3-203ENST00000566025 782 ntBASIC16.38■□□□□ 0.21
RAB40CQ96S21 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAB40CQ96S21 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB40CQ96S21 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB40CQ96S21 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40CQ96S21 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 AC005332.7-201ENST00000614046 2005 ntBASIC16.37■□□□□ 0.21
RAB40CQ96S21 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 MIR2861-201ENST00000636310 90 ntBASIC16.37■□□□□ 0.21
RAB40CQ96S21 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 AC061975.6-201ENST00000579045 1553 ntBASIC16.37■□□□□ 0.21
RAB40CQ96S21 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40CQ96S21 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RAB40CQ96S21 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40CQ96S21 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40CQ96S21 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40CQ96S21 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40CQ96S21 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms