Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.54■■□□□ 1.04
TWNKQ96RR1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.54■■□□□ 1.04
TWNKQ96RR1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.54■■□□□ 1.04
TWNKQ96RR1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.54■■□□□ 1.04
TWNKQ96RR1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TWNKQ96RR1 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.53■■□□□ 1.04
TWNKQ96RR1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TWNKQ96RR1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.53■■□□□ 1.04
TWNKQ96RR1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.53■■□□□ 1.04
TWNKQ96RR1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.53■■□□□ 1.04
TWNKQ96RR1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.53■■□□□ 1.04
TWNKQ96RR1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TWNKQ96RR1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.53■■□□□ 1.04
TWNKQ96RR1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TWNKQ96RR1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TWNKQ96RR1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TWNKQ96RR1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TWNKQ96RR1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TWNKQ96RR1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TWNKQ96RR1 DPP3P2-201ENST00000416030 1696 ntBASIC21.52■■□□□ 1.04
TWNKQ96RR1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TWNKQ96RR1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.52■■□□□ 1.04
TWNKQ96RR1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.03
TWNKQ96RR1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TWNKQ96RR1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.52■■□□□ 1.03
TWNKQ96RR1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 PTBP1P-201ENST00000554374 1601 ntBASIC21.51■■□□□ 1.03
TWNKQ96RR1 SMG8-203ENST00000578922 2178 ntBASIC21.51■■□□□ 1.03
TWNKQ96RR1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.51■■□□□ 1.03
TWNKQ96RR1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TWNKQ96RR1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TWNKQ96RR1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TWNKQ96RR1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TWNKQ96RR1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TWNKQ96RR1 AL512408.1-201ENST00000569378 2000 ntBASIC21.5■■□□□ 1.03
TWNKQ96RR1 GABARAPL3-202ENST00000624044 1851 ntBASIC21.5■■□□□ 1.03
TWNKQ96RR1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.5■■□□□ 1.03
TWNKQ96RR1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms