Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 AC092437.1-201ENST00000624794 1048 ntBASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 AC008694.1-202ENST00000636953 945 ntBASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MS4A4EQ96PG1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MS4A4EQ96PG1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 AL137784.2-201ENST00000607332 1000 ntBASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 IKBKGP1-201ENST00000612193 1073 ntBASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MS4A4EQ96PG1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
MS4A4EQ96PG1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 DPP3P2-201ENST00000416030 1696 ntBASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 OR10C1-204ENST00000622521 1039 ntBASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 SMG8-203ENST00000578922 2178 ntBASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MS4A4EQ96PG1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 AC005181.1-201ENST00000604782 1256 ntBASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 AC080038.1-201ENST00000611274 1154 ntBASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MS4A4EQ96PG1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms