Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL21A1Q96P44 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL21A1Q96P44 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
COL21A1Q96P44 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL21A1Q96P44 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.1■□□□□ 0.65
COL21A1Q96P44 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.1■□□□□ 0.65
COL21A1Q96P44 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL21A1Q96P44 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL21A1Q96P44 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL21A1Q96P44 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COL21A1Q96P44 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL21A1Q96P44 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL21A1Q96P44 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL21A1Q96P44 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.1■□□□□ 0.65
COL21A1Q96P44 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
COL21A1Q96P44 AC231657.2-201ENST00000624556 255 ntBASIC19.1■□□□□ 0.65
COL21A1Q96P44 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL21A1Q96P44 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COL21A1Q96P44 PCDHAC2-203ENST00000615316 3011 ntBASIC19.1■□□□□ 0.65
COL21A1Q96P44 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL21A1Q96P44 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
COL21A1Q96P44 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL21A1Q96P44 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL21A1Q96P44 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL21A1Q96P44 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.09■□□□□ 0.65
COL21A1Q96P44 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL21A1Q96P44 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL21A1Q96P44 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
COL21A1Q96P44 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
COL21A1Q96P44 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL21A1Q96P44 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL21A1Q96P44 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.09■□□□□ 0.65
COL21A1Q96P44 AC007322.4-201ENST00000509611 723 ntBASIC19.09■□□□□ 0.65
COL21A1Q96P44 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.09■□□□□ 0.65
COL21A1Q96P44 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.09■□□□□ 0.65
COL21A1Q96P44 AC073111.5-205ENST00000641717 521 ntBASIC19.09■□□□□ 0.65
COL21A1Q96P44 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.09■□□□□ 0.65
COL21A1Q96P44 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL21A1Q96P44 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL21A1Q96P44 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL21A1Q96P44 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.08■□□□□ 0.65
COL21A1Q96P44 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
COL21A1Q96P44 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL21A1Q96P44 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.08■□□□□ 0.65
COL21A1Q96P44 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL21A1Q96P44 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL21A1Q96P44 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.08■□□□□ 0.64
COL21A1Q96P44 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.08■□□□□ 0.64
COL21A1Q96P44 AC091799.1-201ENST00000422823 811 ntBASIC19.08■□□□□ 0.64
COL21A1Q96P44 AC007322.1-201ENST00000426983 750 ntBASIC19.08■□□□□ 0.64
COL21A1Q96P44 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.08■□□□□ 0.64
COL21A1Q96P44 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.08■□□□□ 0.64
COL21A1Q96P44 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
COL21A1Q96P44 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
COL21A1Q96P44 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.08■□□□□ 0.64
COL21A1Q96P44 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COL21A1Q96P44 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL21A1Q96P44 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.07■□□□□ 0.64
COL21A1Q96P44 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.07■□□□□ 0.64
COL21A1Q96P44 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 CNN2P6-201ENST00000439038 900 ntBASIC19.07■□□□□ 0.64
COL21A1Q96P44 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.07■□□□□ 0.64
COL21A1Q96P44 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.07■□□□□ 0.64
COL21A1Q96P44 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
COL21A1Q96P44 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.07■□□□□ 0.64
COL21A1Q96P44 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.07■□□□□ 0.64
COL21A1Q96P44 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.07■□□□□ 0.64
COL21A1Q96P44 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
COL21A1Q96P44 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL21A1Q96P44 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
COL21A1Q96P44 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL21A1Q96P44 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms