Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.89■□□□□ 0.93
RPRD1AQ96P16 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
RPRD1AQ96P16 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPRD1AQ96P16 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.89■□□□□ 0.93
RPRD1AQ96P16 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPRD1AQ96P16 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.89■□□□□ 0.93
RPRD1AQ96P16 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPRD1AQ96P16 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
RPRD1AQ96P16 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.89■□□□□ 0.93
RPRD1AQ96P16 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RPRD1AQ96P16 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RPRD1AQ96P16 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 HLA-B-256ENST00000639848 1089 ntBASIC20.87■□□□□ 0.93
RPRD1AQ96P16 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPRD1AQ96P16 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.86■□□□□ 0.93
RPRD1AQ96P16 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 AC060766.5-201ENST00000590539 871 ntBASIC20.85■□□□□ 0.93
RPRD1AQ96P16 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPRD1AQ96P16 AC092368.3-202ENST00000574180 1591 ntBASIC20.85■□□□□ 0.93
RPRD1AQ96P16 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPRD1AQ96P16 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms