Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.04■■□□□ 1.12
LRCH3Q96II8 AP000593.1-201ENST00000393668 712 ntBASIC22.04■■□□□ 1.12
LRCH3Q96II8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.04■■□□□ 1.12
LRCH3Q96II8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.04■■□□□ 1.12
LRCH3Q96II8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.04■■□□□ 1.12
LRCH3Q96II8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.04■■□□□ 1.12
LRCH3Q96II8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.04■■□□□ 1.12
LRCH3Q96II8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
LRCH3Q96II8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LRCH3Q96II8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRCH3Q96II8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRCH3Q96II8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRCH3Q96II8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRCH3Q96II8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC22.03■■□□□ 1.12
LRCH3Q96II8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRCH3Q96II8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRCH3Q96II8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRCH3Q96II8 AL390719.1-204ENST00000412397 1219 ntBASIC22.03■■□□□ 1.12
LRCH3Q96II8 PVRIG2P-201ENST00000435460 978 ntBASIC22.03■■□□□ 1.12
LRCH3Q96II8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.03■■□□□ 1.12
LRCH3Q96II8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRCH3Q96II8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
LRCH3Q96II8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
LRCH3Q96II8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRCH3Q96II8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
LRCH3Q96II8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LRCH3Q96II8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
LRCH3Q96II8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRCH3Q96II8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRCH3Q96II8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
LRCH3Q96II8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.02■■□□□ 1.12
LRCH3Q96II8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRCH3Q96II8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
LRCH3Q96II8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.02■■□□□ 1.12
LRCH3Q96II8 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.02■■□□□ 1.12
LRCH3Q96II8 AC246785.2-201ENST00000432512 513 ntBASIC22.02■■□□□ 1.12
LRCH3Q96II8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.02■■□□□ 1.12
LRCH3Q96II8 ECEL1P2-202ENST00000465689 757 ntBASIC22.02■■□□□ 1.12
LRCH3Q96II8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.02■■□□□ 1.12
LRCH3Q96II8 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.02■■□□□ 1.12
LRCH3Q96II8 AL691432.3-201ENST00000621860 400 ntBASIC22.02■■□□□ 1.12
LRCH3Q96II8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC22.02■■□□□ 1.12
LRCH3Q96II8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.02■■□□□ 1.12
LRCH3Q96II8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LRCH3Q96II8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LRCH3Q96II8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
LRCH3Q96II8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
LRCH3Q96II8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
LRCH3Q96II8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.01■■□□□ 1.11
LRCH3Q96II8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRCH3Q96II8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.01■■□□□ 1.11
LRCH3Q96II8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRCH3Q96II8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LRCH3Q96II8 HCG4P8-203ENST00000443049 980 ntBASIC22.01■■□□□ 1.11
LRCH3Q96II8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.01■■□□□ 1.11
LRCH3Q96II8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.01■■□□□ 1.11
LRCH3Q96II8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
LRCH3Q96II8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
LRCH3Q96II8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRCH3Q96II8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
LRCH3Q96II8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.01■■□□□ 1.11
LRCH3Q96II8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LRCH3Q96II8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.01■■□□□ 1.11
LRCH3Q96II8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRCH3Q96II8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRCH3Q96II8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
LRCH3Q96II8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LRCH3Q96II8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
LRCH3Q96II8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LRCH3Q96II8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRCH3Q96II8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22■■□□□ 1.11
LRCH3Q96II8 AC117947.1-201ENST00000427448 529 ntBASIC22■■□□□ 1.11
LRCH3Q96II8 BX664615.1-201ENST00000443558 458 ntBASIC22■■□□□ 1.11
LRCH3Q96II8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRCH3Q96II8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22■■□□□ 1.11
LRCH3Q96II8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
LRCH3Q96II8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
LRCH3Q96II8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRCH3Q96II8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22■■□□□ 1.11
LRCH3Q96II8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRCH3Q96II8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
LRCH3Q96II8 NBPF21P-201ENST00000425093 1451 ntBASIC21.99■■□□□ 1.11
LRCH3Q96II8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
LRCH3Q96II8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.99■■□□□ 1.11
LRCH3Q96II8 FAM8A6P-201ENST00000407496 1135 ntBASIC21.99■■□□□ 1.11
LRCH3Q96II8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 PCED1CP-201ENST00000419887 785 ntBASIC21.99■■□□□ 1.11
LRCH3Q96II8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 AC116562.2-201ENST00000507042 360 ntBASIC21.99■■□□□ 1.11
LRCH3Q96II8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH3Q96II8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.99■■□□□ 1.11
LRCH3Q96II8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms