Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TIMD4Q96H15 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.03■□□□□ 0.32
TIMD4Q96H15 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.03■□□□□ 0.32
TIMD4Q96H15 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.03■□□□□ 0.32
TIMD4Q96H15 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.03■□□□□ 0.32
TIMD4Q96H15 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.03■□□□□ 0.32
TIMD4Q96H15 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMD4Q96H15 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.03■□□□□ 0.32
TIMD4Q96H15 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 FEM1AP4-201ENST00000443167 1987 ntBASIC17.02■□□□□ 0.32
TIMD4Q96H15 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 KRT17P3-201ENST00000420566 1262 ntBASIC17.02■□□□□ 0.32
TIMD4Q96H15 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.02■□□□□ 0.32
TIMD4Q96H15 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TIMD4Q96H15 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TIMD4Q96H15 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TIMD4Q96H15 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TIMD4Q96H15 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.01■□□□□ 0.31
TIMD4Q96H15 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMD4Q96H15 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMD4Q96H15 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TIMD4Q96H15 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMD4Q96H15 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TIMD4Q96H15 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TIMD4Q96H15 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.01■□□□□ 0.31
TIMD4Q96H15 UNC93B4-201ENST00000505679 747 ntBASIC17.01■□□□□ 0.31
TIMD4Q96H15 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMD4Q96H15 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.01■□□□□ 0.31
TIMD4Q96H15 MIR2861-201ENST00000636310 90 ntBASIC17.01■□□□□ 0.31
TIMD4Q96H15 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TIMD4Q96H15 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMD4Q96H15 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMD4Q96H15 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TIMD4Q96H15 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMD4Q96H15 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TIMD4Q96H15 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TIMD4Q96H15 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TIMD4Q96H15 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TIMD4Q96H15 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17■□□□□ 0.31
TIMD4Q96H15 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17■□□□□ 0.31
TIMD4Q96H15 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17■□□□□ 0.31
TIMD4Q96H15 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17■□□□□ 0.31
TIMD4Q96H15 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TIMD4Q96H15 SOX15-203ENST00000570788 1093 ntBASIC17■□□□□ 0.31
TIMD4Q96H15 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17■□□□□ 0.31
TIMD4Q96H15 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TIMD4Q96H15 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TIMD4Q96H15 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms