Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 AC105265.2-201ENST00000467189 838 ntBASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 AP001160.3-201ENST00000601484 763 ntBASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TUBGCP3Q96CW5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBGCP3Q96CW5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBGCP3Q96CW5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBGCP3Q96CW5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 CCDC92B-201ENST00000575506 885 ntBASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 AC005837.3-201ENST00000612163 286 ntBASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.6■□□□□ 0.73
TUBGCP3Q96CW5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TUBGCP3Q96CW5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBGCP3Q96CW5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBGCP3Q96CW5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
TUBGCP3Q96CW5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms