Protein–RNA interactions for Protein: Q96B26

EXOSC8, Exosome complex component RRP43, humanhuman

Known RBP Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8Q96B26 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC8Q96B26 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
EXOSC8Q96B26 PCDHAC2-203ENST00000615316 3011 ntBASIC19.22■□□□□ 0.67
EXOSC8Q96B26 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 KRT8P36-201ENST00000489121 1440 ntBASIC19.21■□□□□ 0.67
EXOSC8Q96B26 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 IKBKGP1-201ENST00000612193 1073 ntBASIC19.21■□□□□ 0.67
EXOSC8Q96B26 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
EXOSC8Q96B26 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
EXOSC8Q96B26 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 SLC25A24-204ENST00000569674 2357 ntBASIC19.2■□□□□ 0.66
EXOSC8Q96B26 AC068338.2-201ENST00000563278 1430 ntBASIC19.2■□□□□ 0.66
EXOSC8Q96B26 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 AL162412.1-201ENST00000567129 965 ntBASIC19.2■□□□□ 0.66
EXOSC8Q96B26 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC8Q96B26 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.19■□□□□ 0.66
EXOSC8Q96B26 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 CYP21A1P-202ENST00000354927 1481 ntBASIC19.19■□□□□ 0.66
EXOSC8Q96B26 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC8Q96B26 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 SMG8-203ENST00000578922 2178 ntBASIC19.18■□□□□ 0.66
EXOSC8Q96B26 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 AC007322.1-201ENST00000426983 750 ntBASIC19.18■□□□□ 0.66
EXOSC8Q96B26 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 AC231657.2-201ENST00000624556 255 ntBASIC19.18■□□□□ 0.66
EXOSC8Q96B26 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
EXOSC8Q96B26 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC8Q96B26 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC8Q96B26 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
EXOSC8Q96B26 AC087633.2-202ENST00000565166 1439 ntBASIC19.17■□□□□ 0.66
EXOSC8Q96B26 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC8Q96B26 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms