Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VPS33AQ96AX1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 AC116050.2-201ENST00000612102 1779 ntBASIC19.42■□□□□ 0.7
VPS33AQ96AX1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS33AQ96AX1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.41■□□□□ 0.7
VPS33AQ96AX1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 AL158211.5-201ENST00000623583 2518 ntBASIC19.41■□□□□ 0.7
VPS33AQ96AX1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS33AQ96AX1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 AC116562.4-201ENST00000641316 2276 ntBASIC19.4■□□□□ 0.7
VPS33AQ96AX1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS33AQ96AX1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VPS33AQ96AX1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.39■□□□□ 0.7
VPS33AQ96AX1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 SLC7A5P2-201ENST00000553010 536 ntBASIC19.39■□□□□ 0.69
VPS33AQ96AX1 AC120498.10-201ENST00000621827 505 ntBASIC19.39■□□□□ 0.69
VPS33AQ96AX1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms