Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
USP7Q93009 DUSP5P2-201ENST00000426873 1033 ntBASIC19.98■□□□□ 0.79
USP7Q93009 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.98■□□□□ 0.79
USP7Q93009 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 GABARAPL3-202ENST00000624044 1851 ntBASIC19.98■□□□□ 0.79
USP7Q93009 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.98■□□□□ 0.79
USP7Q93009 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP7Q93009 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.97■□□□□ 0.79
USP7Q93009 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.97■□□□□ 0.79
USP7Q93009 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
USP7Q93009 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 RPS2P52-201ENST00000469610 820 ntBASIC19.97■□□□□ 0.79
USP7Q93009 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.97■□□□□ 0.79
USP7Q93009 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.97■□□□□ 0.79
USP7Q93009 AC243732.1-201ENST00000612648 864 ntBASIC19.97■□□□□ 0.79
USP7Q93009 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.97■□□□□ 0.79
USP7Q93009 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP7Q93009 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
USP7Q93009 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP7Q93009 AC073314.1-201ENST00000568729 2216 ntBASIC19.96■□□□□ 0.79
USP7Q93009 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
USP7Q93009 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
USP7Q93009 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP7Q93009 AC011484.1-201ENST00000377652 1995 ntBASIC19.96■□□□□ 0.79
USP7Q93009 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
USP7Q93009 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.96■□□□□ 0.79
USP7Q93009 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.96■□□□□ 0.79
USP7Q93009 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.96■□□□□ 0.79
USP7Q93009 AC007225.1-201ENST00000566331 1836 ntBASIC19.96■□□□□ 0.79
USP7Q93009 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP7Q93009 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP7Q93009 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
USP7Q93009 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
USP7Q93009 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP7Q93009 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.96■□□□□ 0.79
USP7Q93009 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP7Q93009 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP7Q93009 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP7Q93009 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP7Q93009 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP7Q93009 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP7Q93009 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.95■□□□□ 0.78
USP7Q93009 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP7Q93009 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP7Q93009 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP7Q93009 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP7Q93009 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
USP7Q93009 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP7Q93009 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.95■□□□□ 0.78
USP7Q93009 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
USP7Q93009 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.95■□□□□ 0.78
USP7Q93009 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.95■□□□□ 0.78
USP7Q93009 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP7Q93009 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP7Q93009 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP7Q93009 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.95■□□□□ 0.78
USP7Q93009 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP7Q93009 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP7Q93009 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.94■□□□□ 0.78
USP7Q93009 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.94■□□□□ 0.78
USP7Q93009 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.94■□□□□ 0.78
USP7Q93009 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.94■□□□□ 0.78
USP7Q93009 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
USP7Q93009 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
USP7Q93009 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP7Q93009 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.94■□□□□ 0.78
USP7Q93009 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.94■□□□□ 0.78
USP7Q93009 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.94■□□□□ 0.78
USP7Q93009 AC098590.1-201ENST00000468126 897 ntBASIC19.94■□□□□ 0.78
USP7Q93009 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.94■□□□□ 0.78
USP7Q93009 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP7Q93009 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP7Q93009 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP7Q93009 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP7Q93009 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms