Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CNOT9Q92600 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
CNOT9Q92600 MIR935-201ENST00000401179 91 ntBASIC18.67■□□□□ 0.58
CNOT9Q92600 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.67■□□□□ 0.58
CNOT9Q92600 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.67■□□□□ 0.58
CNOT9Q92600 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNOT9Q92600 BID-214ENST00000617586 542 ntTSL 5 BASIC18.67■□□□□ 0.58
CNOT9Q92600 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT9Q92600 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT9Q92600 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNOT9Q92600 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.67■□□□□ 0.58
CNOT9Q92600 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNOT9Q92600 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CNOT9Q92600 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.66■□□□□ 0.58
CNOT9Q92600 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.66■□□□□ 0.58
CNOT9Q92600 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.66■□□□□ 0.58
CNOT9Q92600 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.66■□□□□ 0.58
CNOT9Q92600 AL162412.1-201ENST00000567129 965 ntBASIC18.66■□□□□ 0.58
CNOT9Q92600 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.66■□□□□ 0.58
CNOT9Q92600 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.66■□□□□ 0.58
CNOT9Q92600 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT9Q92600 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CNOT9Q92600 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.66■□□□□ 0.58
CNOT9Q92600 AC068338.2-201ENST00000563278 1430 ntBASIC18.66■□□□□ 0.58
CNOT9Q92600 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.65■□□□□ 0.58
CNOT9Q92600 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNOT9Q92600 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CNOT9Q92600 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.65■□□□□ 0.58
CNOT9Q92600 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CNOT9Q92600 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CNOT9Q92600 PCDHAC2-203ENST00000615316 3011 ntBASIC18.65■□□□□ 0.58
CNOT9Q92600 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.65■□□□□ 0.58
CNOT9Q92600 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNOT9Q92600 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.65■□□□□ 0.58
CNOT9Q92600 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CNOT9Q92600 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CNOT9Q92600 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.65■□□□□ 0.58
CNOT9Q92600 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
CNOT9Q92600 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT9Q92600 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.64■□□□□ 0.58
CNOT9Q92600 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNOT9Q92600 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNOT9Q92600 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.64■□□□□ 0.58
CNOT9Q92600 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.64■□□□□ 0.58
CNOT9Q92600 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CNOT9Q92600 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT9Q92600 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT9Q92600 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT9Q92600 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.64■□□□□ 0.57
CNOT9Q92600 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.64■□□□□ 0.57
CNOT9Q92600 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.64■□□□□ 0.57
CNOT9Q92600 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CNOT9Q92600 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT9Q92600 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT9Q92600 CYP21A1P-202ENST00000354927 1481 ntBASIC18.64■□□□□ 0.57
CNOT9Q92600 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT9Q92600 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CNOT9Q92600 SMG8-203ENST00000578922 2178 ntBASIC18.64■□□□□ 0.57
CNOT9Q92600 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT9Q92600 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CNOT9Q92600 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT9Q92600 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT9Q92600 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.63■□□□□ 0.57
CNOT9Q92600 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CNOT9Q92600 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT9Q92600 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.63■□□□□ 0.57
CNOT9Q92600 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT9Q92600 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.63■□□□□ 0.57
CNOT9Q92600 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CNOT9Q92600 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT9Q92600 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CNOT9Q92600 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT9Q92600 AC087633.2-202ENST00000565166 1439 ntBASIC18.63■□□□□ 0.57
CNOT9Q92600 AC112907.3-201ENST00000577781 2400 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms