Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHC3Q92529 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHC3Q92529 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHC3Q92529 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SHC3Q92529 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.67■■□□□ 1.06
SHC3Q92529 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHC3Q92529 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.67■■□□□ 1.06
SHC3Q92529 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.67■■□□□ 1.06
SHC3Q92529 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.67■■□□□ 1.06
SHC3Q92529 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.67■■□□□ 1.06
SHC3Q92529 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHC3Q92529 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.67■■□□□ 1.06
SHC3Q92529 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
SHC3Q92529 CYP2T3P-201ENST00000601990 817 ntBASIC21.67■■□□□ 1.06
SHC3Q92529 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.67■■□□□ 1.06
SHC3Q92529 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHC3Q92529 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHC3Q92529 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHC3Q92529 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.67■■□□□ 1.06
SHC3Q92529 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHC3Q92529 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SHC3Q92529 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.66■■□□□ 1.06
SHC3Q92529 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.66■■□□□ 1.06
SHC3Q92529 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.66■■□□□ 1.06
SHC3Q92529 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.66■■□□□ 1.06
SHC3Q92529 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHC3Q92529 AC010980.2-201ENST00000587099 1412 ntBASIC21.66■■□□□ 1.06
SHC3Q92529 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHC3Q92529 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHC3Q92529 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
SHC3Q92529 KRT18P68-201ENST00000392293 1000 ntBASIC21.66■■□□□ 1.06
SHC3Q92529 AL512625.2-201ENST00000417533 625 ntBASIC21.66■■□□□ 1.06
SHC3Q92529 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.66■■□□□ 1.06
SHC3Q92529 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.66■■□□□ 1.06
SHC3Q92529 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHC3Q92529 AC105020.6-201ENST00000621523 1217 ntBASIC21.66■■□□□ 1.06
SHC3Q92529 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHC3Q92529 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.66■■□□□ 1.06
SHC3Q92529 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.66■■□□□ 1.06
SHC3Q92529 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHC3Q92529 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHC3Q92529 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHC3Q92529 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHC3Q92529 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHC3Q92529 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.65■■□□□ 1.06
SHC3Q92529 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHC3Q92529 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHC3Q92529 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SHC3Q92529 AC112907.3-201ENST00000577781 2400 ntBASIC21.65■■□□□ 1.06
SHC3Q92529 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.65■■□□□ 1.06
SHC3Q92529 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHC3Q92529 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHC3Q92529 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHC3Q92529 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.65■■□□□ 1.06
SHC3Q92529 AC093787.1-201ENST00000450396 207 ntBASIC21.65■■□□□ 1.06
SHC3Q92529 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.65■■□□□ 1.06
SHC3Q92529 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.65■■□□□ 1.06
SHC3Q92529 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.65■■□□□ 1.06
SHC3Q92529 AL050303.2-201ENST00000619798 666 ntBASIC21.65■■□□□ 1.06
SHC3Q92529 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.65■■□□□ 1.06
SHC3Q92529 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.65■■□□□ 1.06
SHC3Q92529 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.65■■□□□ 1.06
SHC3Q92529 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.65■■□□□ 1.06
SHC3Q92529 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHC3Q92529 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHC3Q92529 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SHC3Q92529 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SHC3Q92529 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.64■■□□□ 1.06
SHC3Q92529 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SHC3Q92529 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHC3Q92529 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.64■■□□□ 1.05
SHC3Q92529 AL355472.2-201ENST00000422958 438 ntBASIC21.64■■□□□ 1.05
SHC3Q92529 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
SHC3Q92529 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.64■■□□□ 1.05
SHC3Q92529 AC133552.2-202ENST00000575694 574 ntBASIC21.64■■□□□ 1.05
SHC3Q92529 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.64■■□□□ 1.05
SHC3Q92529 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHC3Q92529 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SHC3Q92529 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHC3Q92529 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHC3Q92529 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.64■■□□□ 1.05
SHC3Q92529 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHC3Q92529 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHC3Q92529 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.63■■□□□ 1.05
SHC3Q92529 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHC3Q92529 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHC3Q92529 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.63■■□□□ 1.05
SHC3Q92529 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.63■■□□□ 1.05
SHC3Q92529 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHC3Q92529 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHC3Q92529 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.63■■□□□ 1.05
SHC3Q92529 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SHC3Q92529 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.63■■□□□ 1.05
SHC3Q92529 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.63■■□□□ 1.05
SHC3Q92529 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHC3Q92529 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHC3Q92529 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
SHC3Q92529 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.63■■□□□ 1.05
SHC3Q92529 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHC3Q92529 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms