Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CCNB3Q8WWL7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC31.36■■■□□ 2.61
CCNB3Q8WWL7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC31.36■■■□□ 2.61
CCNB3Q8WWL7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCNB3Q8WWL7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
CCNB3Q8WWL7 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.36■■■□□ 2.61
CCNB3Q8WWL7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCNB3Q8WWL7 AC007375.3-201ENST00000600936 2314 ntBASIC31.36■■■□□ 2.61
CCNB3Q8WWL7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CCNB3Q8WWL7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCNB3Q8WWL7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 RPS2P55-201ENST00000397318 883 ntBASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 GXYLT1P3-201ENST00000453058 1193 ntBASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 AC107956.1-201ENST00000494359 873 ntBASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCNB3Q8WWL7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CCNB3Q8WWL7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCNB3Q8WWL7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC31.33■■■□□ 2.61
CCNB3Q8WWL7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
CCNB3Q8WWL7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCNB3Q8WWL7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
CCNB3Q8WWL7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC31.33■■■□□ 2.61
CCNB3Q8WWL7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC31.33■■■□□ 2.61
CCNB3Q8WWL7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCNB3Q8WWL7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCNB3Q8WWL7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CCNB3Q8WWL7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 KRASP1-201ENST00000407852 552 ntBASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCNB3Q8WWL7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 AC005229.4-201ENST00000610085 2198 ntBASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 AL390719.1-204ENST00000412397 1219 ntBASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC31.3■■■□□ 2.6
CCNB3Q8WWL7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CCNB3Q8WWL7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
CCNB3Q8WWL7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCNB3Q8WWL7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
CCNB3Q8WWL7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CCNB3Q8WWL7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCNB3Q8WWL7 TSPY7P-201ENST00000431358 1114 ntBASIC31.29■■■□□ 2.6
CCNB3Q8WWL7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCNB3Q8WWL7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms