Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 AL591742.1-201ENST00000604433 565 ntBASIC20.51■□□□□ 0.87
PTCD2Q8WV60 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 KRT8P36-201ENST00000489121 1440 ntBASIC20.51■□□□□ 0.87
PTCD2Q8WV60 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCD2Q8WV60 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 AL512408.1-201ENST00000569378 2000 ntBASIC20.5■□□□□ 0.87
PTCD2Q8WV60 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCD2Q8WV60 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCD2Q8WV60 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 PGM5P4-201ENST00000421970 445 ntBASIC20.48■□□□□ 0.87
PTCD2Q8WV60 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 RARRES2P4-201ENST00000514074 484 ntBASIC20.48■□□□□ 0.87
PTCD2Q8WV60 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 OR10C1-204ENST00000622521 1039 ntBASIC20.48■□□□□ 0.87
PTCD2Q8WV60 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCD2Q8WV60 MKRN4P-201ENST00000444706 1521 ntBASIC20.48■□□□□ 0.87
PTCD2Q8WV60 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 SLC29A4P1-201ENST00000398760 971 ntBASIC20.47■□□□□ 0.87
PTCD2Q8WV60 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.47■□□□□ 0.87
PTCD2Q8WV60 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 MIPEPP3-201ENST00000412105 444 ntBASIC20.46■□□□□ 0.87
PTCD2Q8WV60 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCD2Q8WV60 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms