Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
TRPM4Q8TD43 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRPM4Q8TD43 KRT18P22-201ENST00000402024 1347 ntBASIC24.2■■□□□ 1.46
TRPM4Q8TD43 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRPM4Q8TD43 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.2■■□□□ 1.46
TRPM4Q8TD43 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.2■■□□□ 1.46
TRPM4Q8TD43 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.2■■□□□ 1.46
TRPM4Q8TD43 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.2■■□□□ 1.46
TRPM4Q8TD43 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.19■■□□□ 1.46
TRPM4Q8TD43 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.19■■□□□ 1.46
TRPM4Q8TD43 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRPM4Q8TD43 AC023632.3-201ENST00000521633 145 ntBASIC24.19■■□□□ 1.46
TRPM4Q8TD43 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.19■■□□□ 1.46
TRPM4Q8TD43 WDR88-203ENST00000592765 651 ntTSL 5 BASIC24.19■■□□□ 1.46
TRPM4Q8TD43 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRPM4Q8TD43 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRPM4Q8TD43 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
TRPM4Q8TD43 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRPM4Q8TD43 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRPM4Q8TD43 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
TRPM4Q8TD43 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRPM4Q8TD43 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.17■■□□□ 1.46
TRPM4Q8TD43 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRPM4Q8TD43 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TRPM4Q8TD43 AC116562.2-201ENST00000507042 360 ntBASIC24.17■■□□□ 1.46
TRPM4Q8TD43 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRPM4Q8TD43 AL121906.2-201ENST00000621597 723 ntBASIC24.17■■□□□ 1.46
TRPM4Q8TD43 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.17■■□□□ 1.46
TRPM4Q8TD43 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRPM4Q8TD43 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 C9orf163-202ENST00000624034 2573 ntBASIC24.16■■□□□ 1.46
TRPM4Q8TD43 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.16■■□□□ 1.46
TRPM4Q8TD43 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRPM4Q8TD43 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 AC010203.1-204ENST00000548782 407 ntBASIC24.15■■□□□ 1.46
TRPM4Q8TD43 WWOX-216ENST00000569818 525 ntBASIC24.15■■□□□ 1.46
TRPM4Q8TD43 AC087388.1-201ENST00000571370 1112 ntBASIC24.15■■□□□ 1.46
TRPM4Q8TD43 AC004264.1-201ENST00000608354 794 ntBASIC24.15■■□□□ 1.46
TRPM4Q8TD43 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 CR392000.1-201ENST00000624770 1228 ntBASIC24.15■■□□□ 1.46
TRPM4Q8TD43 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRPM4Q8TD43 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRPM4Q8TD43 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRPM4Q8TD43 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRPM4Q8TD43 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRPM4Q8TD43 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRPM4Q8TD43 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRPM4Q8TD43 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRPM4Q8TD43 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.14■■□□□ 1.45
TRPM4Q8TD43 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.14■■□□□ 1.45
TRPM4Q8TD43 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.14■■□□□ 1.45
TRPM4Q8TD43 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms