Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCHCR1Q8TD31 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCHCR1Q8TD31 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCHCR1Q8TD31 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 KRT18P11-201ENST00000435214 1283 ntBASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCHCR1Q8TD31 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCHCR1Q8TD31 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 AFG3L1P-217ENST00000557444 2447 ntBASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
CCHCR1Q8TD31 AC116050.2-201ENST00000612102 1779 ntBASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.02■□□□□ 0.96
CCHCR1Q8TD31 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCHCR1Q8TD31 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCHCR1Q8TD31 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.02■□□□□ 0.95
CCHCR1Q8TD31 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.02■□□□□ 0.95
CCHCR1Q8TD31 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms