Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.33■■□□□ 1
SHKBP1Q8TBC3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.33■■□□□ 1
SHKBP1Q8TBC3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SHKBP1Q8TBC3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.32■■□□□ 1
SHKBP1Q8TBC3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.31■■□□□ 1
SHKBP1Q8TBC3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SHKBP1Q8TBC3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.3■■□□□ 1
SHKBP1Q8TBC3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.29■■□□□ 1
SHKBP1Q8TBC3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 AC005829.2-201ENST00000571422 1056 ntBASIC21.28■■□□□ 1
SHKBP1Q8TBC3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 Z99916.2-201ENST00000604037 246 ntBASIC21.28■■□□□ 1
SHKBP1Q8TBC3 AC006557.6-201ENST00000623071 864 ntBASIC21.28■■□□□ 1
SHKBP1Q8TBC3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SHKBP1Q8TBC3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHKBP1Q8TBC3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SHKBP1Q8TBC3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SHKBP1Q8TBC3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHKBP1Q8TBC3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHKBP1Q8TBC3 MIR718-201ENST00000390190 70 ntBASIC21.27■■□□□ 1
SHKBP1Q8TBC3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.27■■□□□ 1
SHKBP1Q8TBC3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.27■■□□□ 1
SHKBP1Q8TBC3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SHKBP1Q8TBC3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SHKBP1Q8TBC3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SHKBP1Q8TBC3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms