Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 AC079140.4-201ENST00000507448 529 ntBASIC21.49■■□□□ 1.03
TRIM58Q8NG06 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 AL691432.2-201ENST00000607222 2038 ntBASIC21.49■■□□□ 1.03
TRIM58Q8NG06 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM58Q8NG06 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 AL354811.1-201ENST00000610286 706 ntBASIC21.48■■□□□ 1.03
TRIM58Q8NG06 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM58Q8NG06 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM58Q8NG06 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM58Q8NG06 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM58Q8NG06 PBX2P1-201ENST00000493219 1291 ntBASIC21.47■■□□□ 1.03
TRIM58Q8NG06 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM58Q8NG06 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM58Q8NG06 DPP3P2-201ENST00000416030 1696 ntBASIC21.47■■□□□ 1.03
TRIM58Q8NG06 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM58Q8NG06 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.46■■□□□ 1.03
TRIM58Q8NG06 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 AC106739.1-201ENST00000617035 715 ntBASIC21.46■■□□□ 1.03
TRIM58Q8NG06 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM58Q8NG06 KRT8P36-201ENST00000489121 1440 ntBASIC21.46■■□□□ 1.03
TRIM58Q8NG06 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
TRIM58Q8NG06 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 AC005332.7-201ENST00000614046 2005 ntBASIC21.45■■□□□ 1.02
TRIM58Q8NG06 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 MIR939-201ENST00000401314 82 ntBASIC21.45■■□□□ 1.02
TRIM58Q8NG06 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 AC091305.1-201ENST00000479476 895 ntBASIC21.45■■□□□ 1.02
TRIM58Q8NG06 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM58Q8NG06 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM58Q8NG06 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM58Q8NG06 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM58Q8NG06 BX119927.1-201ENST00000636596 1552 ntBASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms